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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885126.1_cds_XP_016439100.1_34691
CDS Infomation

[gene=LOC107765028] [db_xref=GeneID:107765028] [protein=NADP-dependent malic enzyme-like isoform X2] [protein_id=XP_016439100.1] [location=complement(join(153629..153717,153803..153931,154115..154205,154286..154360,154480..154557,154698..154787,154885..154983,155115..155168,155255..155302,156031..156129,156213..156296,156437..156508,156627..156722,157270..157335,157498..157603,157741..157892,158477..158551,158644..158764,159159..159313))] [gbkey=CDS]
Sequence

ATGGAGAGCACATTGAAGGAAATAACATCAAATGGTGATTCTGTTCTTGATATGAAAGAT
AAATGTGGTGTTGGAGGTGGTGTTGAGGATATGTATGGAGAGGATAGAGCTACTGAAGAT
CAGCCTATCACCCCTTGGACTTTTTCTGTTGCTAGTGGATATAGTTTGTTACGTGATCCA
CATTACAACAAAGGGCTCGCCTTCACTGAAGCAGAGAGAGATGCTCATTATCTGCGCGGC
CTTCTGCCTCCTACTGTTTTAAGCCAAGAACTTCAGGAGAAGAGAATGATACACAATCTC
CGCCAATATCAAGTTCCATTGCAAAGATACATGGCCATGATGGATCTTCAGGAAAGAAAT
GAAAGGTTATTTTACAAGCTTCTCATCGATCATGTTGAAGAGCTATTGCCAATTGTATAT
ACCCCAACAGTTGGCGAGGCTTGCCAGAAGTATGGAAGCATTTTCAGGCGTCCTCAGGGT
CTCTTCATCAGCTTAAAAGAAAAGGGAAAGATTCTTGAGGTATTGAAAAACTGGCCTGAG
AAGAGTATTCAAGTCATTGTTGTTACTGATGGGGAGAGGATATTAGGACTTGGTGATCTT
GGCTGTCAGGGCATGGGTATTCCAGTTGGAAAGCTCTCTCTTTATACTGCTCTTGGGGGT
GTTCGTCCCTCAGTATGTCTTCCTATAACCATTGATGTTGGCACGAACAATCAGCAGTTA
CTGGATAACGAGTTCTACATTGGACTCAAGCAGAAAAGAGCTACAGGGCAGGAATATGCT
GAACTTCTGGATGAGTTTATGTCTGCAGTTAAGCAAAACTACGGAGAGAAAGTCCTCATT
CAGTTTGAAGATTTTGCAAACCACAATGCATTCGATCTTCTTGCAAAGTATCGCACTACA
CATCTTGTATTCAATGATGATATACAGGGCACAGCATCTGTGGTTCTGGCCGGGCTTATT
GCATCTCTAAAACTACTTGGTGGAACACTGGCTGACCATACTTTCTTATTCTTAGGTGCT
GGAGAGGCTGGAACTGGTATTGCTGAGCTCATAGCACTTGAGATAACAAAAAGGACTAGT
GTTCCTTTAGAAGAAGCTCGAAAGAAGATTTGGCTTGTCGACTCTAAGGGACTGGTGGTT
AGTTCTCGTTTGGAGTCCCTTCAGCACTTCAAAAAGCCTTGGGCTCATGATCACGAACCT
GTTAAGGAACTTATAGATGCCGTCAAGGCAATAAAGCCAACTGTTCTAATAGGAACTTCA
GGAGTTGGAAAAACATTTACGAAGGAAGTCGTGGAGACTATGGCTTCTCTCAATCCGAAA
CCTCTCATTATGGCTTTGTCTAATCCGACATCACAAGCTGAATGCACTGCTGAGGAAGCG
TATACATGGAGTAAGGGTCATGCAATCTTTGCTAGTGGAAGCCCATTTGACCCGTTTGAG
TATGAGGGACGGACTTTTGTGTCTGGCCAGGCCAACAATGCCTACATATTCCCTGGATTT
GGTTTGGGAATTATCATGTCTGGCACAATTCGGGTGCATGATGATATGTTACTGGCAGCC
TCGGAAGCTTTGGCAGCTCAGGTGACAGAGGAAGACTATTTAAAGGGACGGATCTACCCA
CCATTCACTAACATCAGAAAAATATCAGCCCATATCGCGGCCGAAGTAGCTGCTAAGGCA
TATGAACTTGGTCTAGCAACGCGTCTCCCTCGTCCTACCAATCTTGAAAAGTATGCTGAG
AGCTGCATGTACACTCCAGTATATCGCACCTATCGCTAA

Peptide Sequence

PEP ID

XP_016439100.1
PEP Infomation

PREDICTED: NADP-dependent malic enzyme-like isoform X2 [Nicotiana tabacum]
Sequence

MESTLKEITSNGDSVLDMKDKCGVGGGVEDMYGEDRATEDQPITPWTFSVASGYSLLRDP
HYNKGLAFTEAERDAHYLRGLLPPTVLSQELQEKRMIHNLRQYQVPLQRYMAMMDLQERN
ERLFYKLLIDHVEELLPIVYTPTVGEACQKYGSIFRRPQGLFISLKEKGKILEVLKNWPE
KSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSVCLPITIDVGTNNQQL
LDNEFYIGLKQKRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYRTT
HLVFNDDIQGTASVVLAGLIASLKLLGGTLADHTFLFLGAGEAGTGIAELIALEITKRTS
VPLEEARKKIWLVDSKGLVVSSRLESLQHFKKPWAHDHEPVKELIDAVKAIKPTVLIGTS
GVGKTFTKEVVETMASLNPKPLIMALSNPTSQAECTAEEAYTWSKGHAIFASGSPFDPFE
YEGRTFVSGQANNAYIFPGFGLGIIMSGTIRVHDDMLLAASEALAAQVTEEDYLKGRIYP
PFTNIRKISAHIAAEVAAKAYELGLATRLPRPTNLEKYAESCMYTPVYRTYR

Transcript Sequence

Gene sequence data has not been registered.